miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|86113626|gb|BB924835.1|BB924835 TTTGAGTCTTCATTGCCACAATGTCTACCTCTTCCATAAACGGCTTTAGTCTTTCTTCTTTGTCACATGCCAAAACTTCT
ATCAAGAAAACTACATTGAGACCCTTTGCATCTCTTAACTCTTCTTCTTCCTCTTCATCTTCTACTTTCCCTTCTCTTAT
TCAAGACAAACCTGTTTTTGCTTCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAG
AAGCAATTCAAGAACTCGAGAAATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACAGCAGCTGAAAAGGTTGAACAAATA
ACAGCTCAACTTGGATCAGTTACAGCTCAAGCTGCAACACCATCATCATCTGATGGTATTCCAACATCTGAAGCCTCAGA
GAGGATCAAAACTGGTTTCATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAG
GCCAAAGCCCCCCGTATATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGA
GAAGCTTTTGTAGTCAGAAA




Most similar to sp|P17067|CAHC_PEA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
           sativum PE=1 SV=1
          Length = 328

 Score =  273 bits (698), Expect = 5e-73
 Identities = 142/172 (82%), Positives = 150/172 (87%), Gaps = 2/172 (1%)
 Frame = +3

Query: 69  AKTSIKKTTLRPF--ASLNXXXXXXXXTFPSLIQDKPVFASSSPFITPILREEMGKGYEE 242
           AKTS K+TTLRPF  ASLN        TFPSLIQDKPVFASSSP ITP+LREEMGKGY+E
Sbjct: 17  AKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMGKGYDE 76

Query: 243 AIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAATPSSSDGIPTSEASERIKTGFI 422
           AI+EL+KLLREK +LKATAAEKVEQITAQLG       T SSSDGIP SEASERIKTGF+
Sbjct: 77  AIEELQKLLREKTELKATAAEKVEQITAQLG-------TTSSSDGIPKSEASERIKTGFL 129

Query: 423 HFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVR 578
           HFKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAFVVR
Sbjct: 130 HFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181